Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852696.1_cds_XP_016511927.1_24619
CDS Infomation

[gene=LOC107829030] [db_xref=GeneID:107829030] [protein=proline--tRNA ligase, cytoplasmic-like] [protein_id=XP_016511927.1] [location=join(20014..20035,20143..20228,20604..20696,20902..21018,21481..21668,21910..21976,23373..23495,23605..23757,23849..24133,24300..24518,25315..25408,25580..25644)] [gbkey=CDS]
Sequence

ATGGCTGGTAAAGATTCAAATAAGGGAAAAAAGAAAGAAGTCAAGAAAGAGACAGGTCTT
GGTCTCTCTTCCAAAAAAGATGAGAATTTTGGGGAGTGGTATTCTGAGGTTGTTGTCAGT
GGTGAAATGATTGAGTACTATGACATTTCTGGCTGTTATATCTTACGGCCATGGGCAATG
TCCATTTGGGAGATATTGCAAACCTTTTTTGATGCTGAAATTAAGAAGATGAAGATAAAG
AACTCCTACTTCCCTCTTTTTGTGTCTCCTGGTGTTCTACAAAAGGAAAAGGACCACATA
GAGGGATTTGCTCCTGAGGTTGCTTGGGTTACAAAATCTGGAGAGTCTGATCTAGAAGTG
CCCATTGCAATTCGACCAACGAGTGAAACAGTGATGTATCCTTATTTCTCTAAGTGGATA
AGGGGACATCGTGACTTGCCCTTGAGACTTAACCAGTGGTGCAACGTTGTGCGATGGGAG
TTTAGCAACCCAACCCCTTTTATCAGGAGCCGTGAGTTTCTCTGGCAAGAAGGACACACT
GCTTTTGCAACTAAGGAGGAGGCAGATGCAGAGGTTCTTGATATCTTGGAGTTGTATAGA
CGTATATATGAAGAATTCTTAGCTGTTCCAGTGAGTAAGGGAAAGAAAAGTGAGCTTGAG
AAGTTTGCTGGTGGACTCTATACGACTACAGTAGAAGCTTTTATCCCTAATACTGGCCGT
GGTATCCAAGGTGCAACTTCACACTGTTTAGGCCAGAATTTTGCAAAAATGTTTGAGATA
AACTTTGAAAACGAGAAGGGAGAGAAGGCTATGGTCTGGCAGAATTCATGGGCCTATACT
ACCAGAACGATTGGGGTGATGATCATGGTTCATGGAGATGATAAAGGCCTGGTCTTACCT
CCTAAAGTTGCAGCAACACAAGTAATTGTTATTCCTGTGCCATACAAGGATGCTAATACT
CAAGGGATCTTTGACGCCTGTGCTGCCACTGTCAAAAACTTGAACGAATCAGGTATTCGT
GCTGAGGCAGACTACAGAGACAACTACTCACCTGGCTGGAAATATTCTCACTGGGAAATG
AAAGGGGTTCCTCTTAGGATTGAAATAGGACCAAAAGATCTTGCAAATAATCAGGTACGA
GCTGTTCGACGTGACAATGGAGCCAAAACTGATATTCCTGTGGCCAATTTAGCCGAACAA
GTAAAAGATGTGCTCGCCTCTATCCAACAAAATCTATTTGATGTTGCAAAACAAAAGCGG
GATGCTTGTGTTCAGGTTGTCAAGACCTGGGATGAATTTGCTGAAGCACTAAGCCAAAAG
AAATTGATCTTGGCTCCTTGGTGTGATGAGGAGGATGTCGAGAAAGACGTGAAGGCACGG
ACAAAAGGGGAGATGGGTGCAGCGAAGACTCTCTGTTCACCATTTGACCAGCCTGAGCTG
CCTGAAGGTACATTGTGCTTTGCCTCGGGTAAACCTGCTAAGAAATGGACATACTGGGGC
CGCAGCTATTGA

Peptide Sequence

PEP ID

XP_016511927.1
PEP Infomation

PREDICTED: proline--tRNA ligase, cytoplasmic-like [Nicotiana tabacum]
Sequence

MAGKDSNKGKKKEVKKETGLGLSSKKDENFGEWYSEVVVSGEMIEYYDISGCYILRPWAM
SIWEILQTFFDAEIKKMKIKNSYFPLFVSPGVLQKEKDHIEGFAPEVAWVTKSGESDLEV
PIAIRPTSETVMYPYFSKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHT
AFATKEEADAEVLDILELYRRIYEEFLAVPVSKGKKSELEKFAGGLYTTTVEAFIPNTGR
GIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNSWAYTTRTIGVMIMVHGDDKGLVLP
PKVAATQVIVIPVPYKDANTQGIFDACAATVKNLNESGIRAEADYRDNYSPGWKYSHWEM
KGVPLRIEIGPKDLANNQVRAVRRDNGAKTDIPVANLAEQVKDVLASIQQNLFDVAKQKR
DACVQVVKTWDEFAEALSQKKLILAPWCDEEDVEKDVKARTKGEMGAAKTLCSPFDQPEL
PEGTLCFASGKPAKKWTYWGRSY

Transcript Sequence

Gene sequence data has not been registered.